STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI44702.1Ammonium transporter, Amt family. (415 aa)    
Predicted Functional Partners:
SEI44684.1
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
 0.999
SEI52505.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.998
SEI63845.1
PAS domain S-box-containing protein.
 
 0.864
SEI66684.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
  
 
 0.830
SEI47875.1
Glutamate synthase (NADPH/NADH) large chain.
 
  
 0.815
SEI77780.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
   
 0.754
SEI52822.1
PAS domain S-box-containing protein.
  
 0.741
SEI75691.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
   
 0.709
SEI79114.1
PAS domain S-box-containing protein.
  
 0.694
SEI91896.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.692
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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