STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI49879.1Sirohydrochlorin cobaltochelatase. (115 aa)    
Predicted Functional Partners:
SEI71708.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase/uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.998
SEI49900.1
Hypothetical protein.
       0.786
SEI52458.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
    
 0.727
SEI49863.1
DNA-binding transcriptional regulator, MerR family.
       0.597
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    
 0.593
SEI92907.1
Adenylylsulfate kinase/bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate.
  
  
 0.585
SEI64643.1
Sulfite reductase (NADPH) hemoprotein beta-component.
  
  
 0.548
SEI49917.1
Hypothetical protein.
       0.535
SEI44887.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
  
 0.531
cysD
Sulfate adenylyltransferase subunit 2.
  
  
 0.529
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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