STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI50177.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
SEI50156.1
Hypothetical protein.
   
 0.991
SEI50140.1
Uncharacterized conserved protein, contains GH25 family domain.
 
   
 0.937
SEI50189.1
Outer membrane receptor for ferrienterochelin and colicins.
 
   
 0.859
SEI87038.1
CxxC motif-containing protein, DUF1111 family.
   
    0.468
SEI83375.1
Hypothetical protein.
 
     0.466
SEI38344.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.451
SEI75539.1
Microcin C transport system substrate-binding protein.
  
    0.409
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.