STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI55763.1Glycosyltransferase involved in cell wall bisynthesis. (449 aa)    
Predicted Functional Partners:
SEI68052.1
Alpha-1,3-rhamnosyl/mannosyltransferase.
 
   
 0.941
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.907
SEI50632.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
 
 0.870
SEI68027.1
Mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.870
SEI68004.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.859
apaH
Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.823
SEI78284.1
Tetratricopeptide repeat-containing protein.
   
 0.809
SEI49554.1
(heptosyl)LPS beta-1,4-glucosyltransferase.
  
 
 0.768
SEI67259.1
Lipopolysaccharide transport system ATP-binding protein.
 
 
 0.754
SEI86941.1
CBS domain-containing protein.
  
 0.753
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.