STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI55812.1NADPH2:quinone reductase. (340 aa)    
Predicted Functional Partners:
SEI39039.1
[acyl-carrier-protein] S-malonyltransferase.
   
 0.951
SEI39010.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
 0.944
SEI37874.1
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.876
SEI49962.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.832
SEI55401.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.812
SEI55828.1
Hypothetical protein.
       0.689
SEI86609.1
Carbamoyl-phosphate synthase large subunit.
    
 0.665
SEI85445.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 0.664
SEI75164.1
fatty-acyl-CoA synthase.
   
 0.656
SEI68502.1
Acyl dehydratase.
  
 0.650
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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