STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI64508.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
SEI77980.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
 
 0.775
SEI64492.1
Hypothetical protein.
       0.732
SEI64531.1
Two-component system, OmpR family, response regulator RstA/two-component system, OmpR family, response regulator BaeR.
     
 0.681
SEI64550.1
Two-component system, OmpR family, response regulator/two-component system, OmpR family, response regulator RstA.
     
 0.681
SEI85016.1
Zn-dependent peptidase ImmA, M78 family.
    
 0.489
SEI78284.1
Tetratricopeptide repeat-containing protein.
    
 0.487
SEI72813.1
Ca-activated chloride channel family protein.
    
 0.481
SEI83375.1
Hypothetical protein.
    
 0.481
SEI84952.1
Helix-turn-helix domain-containing protein.
    
 0.480
SEI37353.1
PAS domain S-box-containing protein.
     
 0.426
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.