STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI67761.1Hypothetical protein. (322 aa)    
Predicted Functional Partners:
SEI67783.1
Hypothetical protein.
       0.773
SEI51446.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.685
SEI67830.1
ABC-2 type transport system permease protein.
       0.591
SEI67809.1
ABC-2 type transport system ATP-binding protein.
       0.569
SEI78212.1
Hypothetical protein.
  
   
 0.526
SEI39399.1
Glycerophosphoryl diester phosphodiesterase.
    
  0.491
SEI70259.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
  
  
 0.457
SEI38104.1
TrkA-C domain-containing protein.
  
    0.427
SEI75985.1
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
  
    0.427
SEI67852.1
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.
       0.418
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.