STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI66635.1ABC-type uncharacterized transport system, substrate-binding protein. (220 aa)    
Predicted Functional Partners:
SEI66613.1
ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
   
 0.930
SEI82389.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
  
 0.582
SEI66669.1
Protein of unknown function.
       0.564
SEI37210.1
Putative membrane protein.
  
     0.555
SEI74281.1
Acyltransferase.
     
 0.497
SEI85684.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.497
SEI66684.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 
     0.458
SEI51956.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.