Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERI05303.1 | ERI11360.1 | HMPREF0083_05696 | HMPREF0083_00504 | Kinase PrkA; KEGG: oih:OB2654 1.2e-269 serine protein kinase K07180; Psort location: Cytoplasmic, score: 7.50. | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | 0.516 |
ERI06460.1 | ERI11360.1 | HMPREF0083_05302 | HMPREF0083_00504 | Peptidase M15; KEGG: sna:Snas_1443 0.0019 zinc D-Ala-D-Ala carboxypeptidase. | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | 0.495 |
ERI11360.1 | ERI05303.1 | HMPREF0083_00504 | HMPREF0083_05696 | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | Kinase PrkA; KEGG: oih:OB2654 1.2e-269 serine protein kinase K07180; Psort location: Cytoplasmic, score: 7.50. | 0.516 |
ERI11360.1 | ERI06460.1 | HMPREF0083_00504 | HMPREF0083_05302 | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | Peptidase M15; KEGG: sna:Snas_1443 0.0019 zinc D-Ala-D-Ala carboxypeptidase. | 0.495 |
ERI11360.1 | ERI11361.1 | HMPREF0083_00504 | HMPREF0083_00505 | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
ERI11360.1 | ERI11362.1 | HMPREF0083_00504 | HMPREF0083_00506 | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.416 |
ERI11361.1 | ERI11360.1 | HMPREF0083_00505 | HMPREF0083_00504 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
ERI11361.1 | ERI11362.1 | HMPREF0083_00505 | HMPREF0083_00506 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.416 |
ERI11362.1 | ERI11360.1 | HMPREF0083_00506 | HMPREF0083_00504 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | Toxin-antitoxin system, toxin component, Fic domain protein; Psort location: Cytoplasmic, score: 7.50. | 0.416 |
ERI11362.1 | ERI11361.1 | HMPREF0083_00506 | HMPREF0083_00505 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.416 |