STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI11261.1Protein, SNF2 family; KEGG: crd:CRES_1547 1.1e-147 DNA repair and recombination protein; Psort location: CytoplasmicMembrane, score: 8.16. (453 aa)    
Predicted Functional Partners:
ERI11262.1
VRR-NUC domain protein; KEGG: alt:ambt_21065 0.0044 DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 7.50.
 
     0.949
ERI11259.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.925
ERI11263.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 7.50.
 
     0.873
ERI11260.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.868
ERI11258.1
HNH endonuclease domain protein; KEGG: eco:b1159 0.00011 mcrA; e14 prophage; 5-methylcytosine-specific restriction endonuclease B K07451; Psort location: Cytoplasmic, score: 7.50.
 
     0.861
ERI11264.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.845
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.839
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 0.839
ERI11255.1
KEGG: lru:HMPREF0538_20482 5.1e-157 dcm; DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.829
ERI06482.1
VRR-NUC domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.787
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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