STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI11279.1Type III restriction enzyme, res subunit; Psort location: Cytoplasmic, score: 7.50. (835 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.970
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.969
ERI11277.1
Hypothetical protein; KEGG: edi:EDI_015760 8.1e-08 structural maintenance of chromosomes protein K06675; Psort location: Cytoplasmic, score: 7.50.
 
     0.953
ERI11278.1
KEGG: hmo:HM1_2925 0. DNA methylase; K00571 site-specific DNA-methyltransferase (adenine-specific); Psort location: Cytoplasmic, score: 7.50.
 
     0.953
ERI11275.1
Hypothetical protein; KEGG: geb:GM18_0165 0.0067 PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA.
 
     0.952
ERI11276.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.952
dinG
DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease.
   
 0.936
ERI05045.1
DnaQ family exonuclease/DinG family helicase; KEGG: pbs:Plabr_1949 6.7e-100 helicase c2; K03722 ATP-dependent DNA helicase DinG; Psort location: Cytoplasmic, score: 7.50.
   
 0.936
ERI08022.1
Bacterial RNA polymerase, alpha chain domain protein; KEGG: mlu:Mlut_16900 8.5e-09 DNA-directed RNA polymerase subunit alpha K03040; Psort location: Cytoplasmic, score: 7.50.
    
  0.923
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.923
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.