STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI10876.1Glycosyl hydrolase family 25; KEGG: ppo:PPM_1073 3.8e-33 acm1; lysozyme M1 1,4-beta-N-acetylmuramidase M1; Flags: Precursor; Psort location: Extracellular, score: 9.72. (256 aa)    
Predicted Functional Partners:
ERI07136.1
KEGG: sen:SACE_0392 6.6e-05 hypothetical protein; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Cytoplasmic, score: 7.50.
  
 0.817
ERI10875.1
Hypothetical protein.
       0.773
ERI10877.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
ERI10878.1
Hypothetical protein.
       0.757
ERI10879.1
Phage minor structural protein; Psort location: Cytoplasmic, score: 7.50.
       0.751
ERI10880.1
Hypothetical protein.
       0.740
ERI07580.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
 
 0.600
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.576
ERI10881.1
Hypothetical protein.
       0.574
ERI10882.1
Hypothetical protein.
       0.574
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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