STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI10055.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (76 aa)    
Predicted Functional Partners:
ERI10056.1
Transcriptional regulatory protein ResD; KEGG: bde:BDP_0386 1.7e-46 vicR; response regulator protein Vicr K07776; Psort location: Cytoplasmic, score: 9.97.
       0.505
ERI10057.1
Putative sensor histidine kinase ResE; KEGG: gct:GC56T3_1224 9.4e-149 multi-sensor signal transduction histidine kinase; K07651 two-component system, OmpR family, sensor histidine kinase ResE; Psort location: CytoplasmicMembrane, score: 9.81.
       0.505
ERI10058.1
KEGG: efl:EF62_1218 2.0e-75 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 7.94.
       0.505
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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