STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI09638.1KEGG: dth:DICTH_1584 1.5e-56 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (317 aa)    
Predicted Functional Partners:
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 0.847
ERI08090.1
KEGG: bbe:BBR47_22040 1.3e-220 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; K00547 homocysteine S-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.784
ERI10085.1
KEGG: gym:GYMC10_1001 0. pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit.
  
 
 0.753
ERI08282.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bcy:Bcer98_2426 2.5e-228 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.746
ERI10084.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: bco:Bcell_2177 1.4e-138 pyruvate/ketoisovalerate oxidoreductase subunit gamma; K00172 pyruvate ferredoxin oxidoreductase, gamma subunit; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.742
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
   0.724
ERI09637.1
ATP:cob(I)alamin adenosyltransferase; KEGG: hhd:HBHAL_2067 3.1e-54 pduO; cob(I)yrinic acid a,c-diamide adenosyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the Cob(I)alamin adenosyltransferase family.
 
     0.702
ERI05699.1
Phosphoribosylamine--glycine ligase; KEGG: bbe:BBR47_51900 1.0e-94 hypothetical protein; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
  
 0.699
ERI05700.1
KEGG: bbe:BBR47_51910 6.3e-127 pyridoxal-phosphate dependent enzyme; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 7.50.
  
 0.699
rplB
Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
    
   0.665
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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