Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERI08986.1 | ERI09437.1 | HMPREF0083_02932 | HMPREF0083_02483 | KEGG: pmw:B2K_02670 6.1e-14 protein GuaA; K01951 GMP synthase (glutamine-hydrolysing); Psort location: CytoplasmicMembrane, score: 9.55. | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | 0.551 |
ERI08986.1 | guaA | HMPREF0083_02932 | HMPREF0083_03236 | KEGG: pmw:B2K_02670 6.1e-14 protein GuaA; K01951 GMP synthase (glutamine-hydrolysing); Psort location: CytoplasmicMembrane, score: 9.55. | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | 0.816 |
ERI09436.1 | ERI09437.1 | HMPREF0083_02482 | HMPREF0083_02483 | Resolvase protein; Psort location: Cytoplasmic, score: 7.50. | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | 0.553 |
ERI09437.1 | ERI08986.1 | HMPREF0083_02483 | HMPREF0083_02932 | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | KEGG: pmw:B2K_02670 6.1e-14 protein GuaA; K01951 GMP synthase (glutamine-hydrolysing); Psort location: CytoplasmicMembrane, score: 9.55. | 0.551 |
ERI09437.1 | ERI09436.1 | HMPREF0083_02483 | HMPREF0083_02482 | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | Resolvase protein; Psort location: Cytoplasmic, score: 7.50. | 0.553 |
ERI09437.1 | ERI09438.1 | HMPREF0083_02483 | HMPREF0083_02484 | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.558 |
ERI09437.1 | guaA | HMPREF0083_02483 | HMPREF0083_03236 | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | 0.551 |
ERI09438.1 | ERI09437.1 | HMPREF0083_02484 | HMPREF0083_02483 | Hypothetical protein. | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | 0.558 |
guaA | ERI08986.1 | HMPREF0083_03236 | HMPREF0083_02932 | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | KEGG: pmw:B2K_02670 6.1e-14 protein GuaA; K01951 GMP synthase (glutamine-hydrolysing); Psort location: CytoplasmicMembrane, score: 9.55. | 0.816 |
guaA | ERI09437.1 | HMPREF0083_03236 | HMPREF0083_02483 | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | DNA-binding helix-turn-helix protein; KEGG: btb:BMB171_C3377 0.00052 LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. | 0.551 |