STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI08854.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (50 aa)    
Predicted Functional Partners:
ERI08853.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.774
ERI08022.1
Bacterial RNA polymerase, alpha chain domain protein; KEGG: mlu:Mlut_16900 8.5e-09 DNA-directed RNA polymerase subunit alpha K03040; Psort location: Cytoplasmic, score: 7.50.
    
   0.729
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.729
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.653
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.653
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.653
ERI10660.1
Sigma-70, region 4; KEGG: pmj:P9211_18311 0.00096 type II alternative sigma-70 family RNA polymerase sigma factor K03086; Psort location: Cytoplasmic, score: 7.50.
    
   0.530
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.530
ERI07169.1
Sigma-70, region 4; KEGG: hpa:HPAG1_0089 5.1e-08 RNA polymerase sigma factor RpoD K03086; Psort location: Cytoplasmic, score: 7.50.
    
   0.530
ERI08855.1
Putative toxin-antitoxin system, toxin component; KEGG: cnc:CNE_2c21000 5.9e-05 vanB; vanillate O-demethylase oxidoreductase protein VanB.
       0.505
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.