Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERI08839.1 | ERI09455.1 | HMPREF0083_03121 | HMPREF0083_02459 | KEGG: bmd:BMD_3285 3.1e-38 GNAT family acetyltransferase. | Tetratricopeptide repeat protein; KEGG: bmd:BMD_1453 3.3e-122 C39 family peptidase; Psort location: Cytoplasmic, score: 7.50. | 0.412 |
ERI08839.1 | ERI11180.1 | HMPREF0083_03121 | HMPREF0083_00738 | KEGG: bmd:BMD_3285 3.1e-38 GNAT family acetyltransferase. | Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 3.8e-17 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: CytoplasmicMembrane, score: 8.78. | 0.403 |
ERI09455.1 | ERI08839.1 | HMPREF0083_02459 | HMPREF0083_03121 | Tetratricopeptide repeat protein; KEGG: bmd:BMD_1453 3.3e-122 C39 family peptidase; Psort location: Cytoplasmic, score: 7.50. | KEGG: bmd:BMD_3285 3.1e-38 GNAT family acetyltransferase. | 0.412 |
ERI09455.1 | ERI11180.1 | HMPREF0083_02459 | HMPREF0083_00738 | Tetratricopeptide repeat protein; KEGG: bmd:BMD_1453 3.3e-122 C39 family peptidase; Psort location: Cytoplasmic, score: 7.50. | Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 3.8e-17 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: CytoplasmicMembrane, score: 8.78. | 0.498 |
ERI11180.1 | ERI08839.1 | HMPREF0083_00738 | HMPREF0083_03121 | Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 3.8e-17 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: CytoplasmicMembrane, score: 8.78. | KEGG: bmd:BMD_3285 3.1e-38 GNAT family acetyltransferase. | 0.403 |
ERI11180.1 | ERI09455.1 | HMPREF0083_00738 | HMPREF0083_02459 | Transcriptional regulator, AraC family; KEGG: ppo:PPM_0977 3.8e-17 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: CytoplasmicMembrane, score: 8.78. | Tetratricopeptide repeat protein; KEGG: bmd:BMD_1453 3.3e-122 C39 family peptidase; Psort location: Cytoplasmic, score: 7.50. | 0.498 |