STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI08516.1PAS domain S-box protein; KEGG: reh:H16_B1962 4.0e-67 PspF family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97. (529 aa)    
Predicted Functional Partners:
ERI11078.1
KEGG: cbo:CBO0224 7.2e-87 hno; RNA polymerase factor sigma-54 K03092; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.816
ERI09290.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dai:Desaci_0394 8.9e-89 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
  0.506
ERI08517.1
KEGG: gth:Geoth_3968 1.8e-106 proline dehydrogenase K00318; Psort location: Cytoplasmic, score: 9.97.
       0.506
ERI11480.1
KEGG: hhd:HBHAL_2780 8.1e-95 cheV; chemotaxis protein CheV K03415; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.407
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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