STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI08452.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
ERI08453.1
Hypothetical protein; KEGG: bbe:BBR47_18860 0.00010 N-acetylmuramoyl-L-alanine amidase K01448; Psort location: CytoplasmicMembrane, score: 9.87.
       0.773
ERI08451.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.551
ERI08454.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.425
ERI08450.1
Sigma-70, region 4; KEGG: bcy:Bcer98_3783 2.1e-06 RNA polymerase factor sigma-70; K00960 DNA-directed RNA polymerase; Psort location: Cytoplasmic, score: 7.50; Belongs to the sigma-70 factor family. ECF subfamily.
       0.419
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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