STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI08225.1KEGG: bmh:BMWSH_0404 2.0e-84 pseudouridylate synthase (ribosomal small subunit pseudouridine synthase A); K06183 16S rRNA pseudouridine516 synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family. (242 aa)    
Predicted Functional Partners:
cmk
Cytidylate kinase; KEGG: bbe:BBR47_24410 1.0e-57 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 9.97.
  
 0.775
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.757
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
  
 0.636
ERI08226.1
NOL1/NOP2/sun family protein; KEGG: bbe:BBR47_43550 2.8e-117 ribosomal RNA small subunit methyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.633
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
  
 0.490
ERI08224.1
KEGG: crn:CAR_c17850 9.1e-05 type I phosphodiesterase/nucleotide pyrophosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.490
ERI04065.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.487
ERI10086.1
KEGG: bts:Btus_0401 9.2e-87 RelA/SpoT domain-containing protein; K07816 putative GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50.
       0.459
pheT
KEGG: pmq:PM3016_6433 4.4e-245 phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain; Psort location: Cytoplasmic, score: 9.97.
     
 0.456
ERI11141.1
Hypothetical protein; KEGG: bbe:BBR47_20400 7.3e-165 hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
 
   0.455
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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