STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI07859.1CRISPR-associated regulatory protein, DevR family. (297 aa)    
Predicted Functional Partners:
ERI07858.1
CRISPR-associated protein Cas5, Tneap subtype; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.993
ERI07857.1
KEGG: rcp:RCAP_rcc01300 2.0e-07 Cas3 family CRISPR-associated helicase K07012; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.973
ERI07860.1
CRISPR-associated cxxc_cxxc protein Cst1; KEGG: mse:Msed_2267 0.0067 hisS; histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.960
ERI07861.1
CRISPR-associated endoribonuclease Cas6; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.959
cas2
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
   
 0.883
cas1
CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
   
 0.881
ERI07856.1
Hypothetical protein; KEGG: cdu:CD36_60270 0.00020 DNA replication ATP-dependent helicase, putative K10742; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.869
ERI07862.1
HTH domain protein; KEGG: bqy:MUS_2079 7.9e-14 transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
     0.676
ERI06799.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.489
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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