STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI07500.1Sigma-54 interaction domain protein; KEGG: cnc:CNE_1c18820 1.2e-40 prpR; propionate catabolism activator PrpR K02688; Psort location: Cytoplasmic, score: 9.67. (327 aa)    
Predicted Functional Partners:
ERI11078.1
KEGG: cbo:CBO0224 7.2e-87 hno; RNA polymerase factor sigma-54 K03092; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.820
ERI07501.1
Hypothetical protein; KEGG: pfe:PSF113_4591 2.8e-06 Sigma-54 dependent transcriptional regulator/sensory box protein; Psort location: Cytoplasmic, score: 7.50.
     0.651
ERI07499.1
Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN2130 7.4e-62 dioxygenase subunit alpha K00470; Psort location: Cytoplasmic, score: 7.50.
       0.426
ERI11480.1
KEGG: hhd:HBHAL_2780 8.1e-95 cheV; chemotaxis protein CheV K03415; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.407
Your Current Organism:
Aneurinibacillus aneurinilyticus
NCBI taxonomy Id: 649747
Other names: A. aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus ATCC 12856, Aneurinibacillus aneurinilyticus DSM 5562, Aneurinibacillus aneurinilyticus str. ATCC 12856, Aneurinibacillus aneurinilyticus strain ATCC 12856
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