Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERI06987.1 | ERI06988.1 | HMPREF0083_04941 | HMPREF0083_04942 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 1.9e-54 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.51. | 0.956 |
ERI06987.1 | ERI06989.1 | HMPREF0083_04941 | HMPREF0083_04943 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | KEGG: btk:BT9727_3817 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. | 0.863 |
ERI06987.1 | ERI06990.1 | HMPREF0083_04941 | HMPREF0083_04944 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.477 |
ERI06988.1 | ERI06987.1 | HMPREF0083_04942 | HMPREF0083_04941 | ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 1.9e-54 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.51. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.956 |
ERI06988.1 | ERI06989.1 | HMPREF0083_04942 | HMPREF0083_04943 | ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 1.9e-54 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.51. | KEGG: btk:BT9727_3817 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. | 0.952 |
ERI06988.1 | ERI06990.1 | HMPREF0083_04942 | HMPREF0083_04944 | ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 1.9e-54 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.51. | Hypothetical protein. | 0.477 |
ERI06989.1 | ERI06987.1 | HMPREF0083_04943 | HMPREF0083_04941 | KEGG: btk:BT9727_3817 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.863 |
ERI06989.1 | ERI06988.1 | HMPREF0083_04943 | HMPREF0083_04942 | KEGG: btk:BT9727_3817 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. | ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 1.9e-54 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.51. | 0.952 |
ERI06989.1 | ERI06990.1 | HMPREF0083_04943 | HMPREF0083_04944 | KEGG: btk:BT9727_3817 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.477 |
ERI06990.1 | ERI06987.1 | HMPREF0083_04944 | HMPREF0083_04941 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.477 |
ERI06990.1 | ERI06988.1 | HMPREF0083_04944 | HMPREF0083_04942 | Hypothetical protein. | ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_11208 1.9e-54 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.51. | 0.477 |
ERI06990.1 | ERI06989.1 | HMPREF0083_04944 | HMPREF0083_04943 | Hypothetical protein. | KEGG: btk:BT9727_3817 8.5e-13 GntR family transcriptional regulator K07979; Psort location: Cytoplasmic, score: 7.50. | 0.477 |
ERI06990.1 | ERI11480.1 | HMPREF0083_04944 | HMPREF0083_00467 | Hypothetical protein. | KEGG: hhd:HBHAL_2780 8.1e-95 cheV; chemotaxis protein CheV K03415; Psort location: Cytoplasmic, score: 9.97. | 0.407 |
ERI11480.1 | ERI06990.1 | HMPREF0083_00467 | HMPREF0083_04944 | KEGG: hhd:HBHAL_2780 8.1e-95 cheV; chemotaxis protein CheV K03415; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein. | 0.407 |