STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN34494.1Iron hydrogenase 1. (570 aa)    
Predicted Functional Partners:
gltD_1
Glutamate synthase [NADPH] small chain.
 
 0.999
CUO39603.1
Ferredoxin.
   
 
 0.973
porA
Pyruvate synthase subunit porA.
  
 
 0.936
gltD_2
Glutamate synthase [NADPH] small chain.
    
 0.932
rnfB
Nitrogen fixation protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 
 0.916
CUO13577.1
Iron hydrogenase 1.
 
 
 
0.904
rbr1
NADH peroxidase.
    
 0.891
bioB_2
Biotin synthase.
 
  
 0.883
der_1
GTP-binding protein EngA.
 
   
 0.848
CUO09454.1
Iron hydrogenase 1.
 
 
 
0.820
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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