STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srrA_1Staphylococcal respiratory response protein A. (229 aa)    
Predicted Functional Partners:
yycG
Sensor histidine kinase YycG.
 
 0.969
divL
Sensor protein divL.
 
 
 0.916
senX3
Signal-transduction histidine kinase senX3.
 
 0.867
phoR_4
Alkaline phosphatase synthesis sensor protein phoR.
 
 0.863
phoR_6
Phosphate regulon sensor protein phoR.
 
 0.858
phoR_5
Alkaline phosphatase synthesis sensor protein phoR.
 
 0.842
phoR_2
Alkaline phosphatase synthesis sensor protein phoR.
 
 0.830
phoR_1
Alkaline phosphatase synthesis sensor protein phoR.
 
 0.809
truC
tRNA pseudouridine synthase C.
 
     0.804
barA_1
Signal transduction histidine-protein kinase BarA.
 
   0.798
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.