STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
homHomoserine dehydrogenase. (428 aa)    
Predicted Functional Partners:
thrC
Threonine synthase.
 
 
 0.970
lysC_2
Aspartokinase 2; Belongs to the aspartokinase family.
 
 0.955
asd2
Aspartate-semialdehyde dehydrogenase 2; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 0.832
ilvH_1
Acetolactate synthase small subunit.
  
  
 0.747
ilvH_2
Acetolactate synthase small subunit.
  
  
 0.747
trpD
Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
   
  
 0.658
lysC_1
Aspartokinase.
 
 
 0.613
purL
Phosphoribosylformylglycinamidine synthase 2.
  
  
 0.567
pheA
P-protein.
     
 0.534
tyrC
Arogenate dehydrogenase.
  
   
 0.534
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.