STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdpD_1Sensor protein KdpD. (383 aa)    
Predicted Functional Partners:
kdpE_1
KDP operon transcriptional regulatory protein KdpE.
 
 0.966
kdpE_2
KDP operon transcriptional regulatory protein KdpE.
 
 0.853
yycF
Transcriptional regulatory protein YycF.
   0.774
ywiB
Uncharacterized beta-barrel protein ywiB.
       0.773
walR_2
Transcriptional regulatory protein walR.
 
 0.752
racE
Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.746
saeR
Staphylococcus exoprotein expression protein R.
 
 0.743
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
 
 0.738
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.734
mprA
Mycobacterial persistence regulator A.
 
 0.721
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.