STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN56201.1Maltose ABC transporter periplasmic protein. (439 aa)    
Predicted Functional Partners:
nreB
Oxygen sensor histidine kinase nreB.
 
    0.955
nreC
Nitrogen regulation protein C.
 
    0.951
rbsB
D-ribose-binding periplasmic protein precursor.
 
  
 0.949
manX_2
EIIAB-Man.
 
    0.864
manX_3
EIIAB-Man.
 
   
 0.861
manY_1
PTS system mannose-specific EIIC component.
 
   
 0.855
manZ_2
PTS system mannose-specific EIID component.
 
    0.833
sacC
Levanase precursor.
 
   
 0.498
CUN56441.1
Uncharacterised protein.
  
    0.406
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.400
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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