STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqETyrosine-protein phosphatase YwqE. (243 aa)    
Predicted Functional Partners:
ywqD_1
Tyrosine-protein kinase YwqD.
 
  
 0.939
ywqD_2
Tyrosine-protein kinase YwqD.
 
  
 0.939
cap8A
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
 
 0.911
cpsD
Tyrosine-protein kinase CpsD.
 
  
 0.829
CUN58379.1
Uncharacterised protein.
 
     0.829
wcaJ_1
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.611
wcaJ_3
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.610
lmrA
Multidrug resistance ABC transporter ATP-binding and permease protein.
 
     0.602
CUN58064.1
Anaerobic sulfatase-maturating enzyme.
 
     0.579
CUN58261.1
Uncharacterised protein.
       0.570
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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