STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frdAFumarate reductase flavoprotein subunit. (514 aa)    
Predicted Functional Partners:
frdB
Fumarate reductase iron-sulfur subunit.
 
 0.999
porA
Pyruvate synthase subunit porA.
  
 
 0.982
ttdA
L(+)-tartrate dehydratase subunit alpha.
  
 
 0.950
nadC
Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
   
 0.933
CUO13577.1
Iron hydrogenase 1.
  
 
 0.923
gltD_1
Glutamate synthase [NADPH] small chain.
  
 
 0.920
CUN70796.1
Uncharacterised protein.
       0.831
cadA_2
Cadmium%2C zinc and cobalt-transporting ATPase.
 
    0.816
aspC
Aspartate aminotransferase.
   
 
 0.813
CUN70752.1
Uncharacterised protein.
       0.789
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.