STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN85010.1Anaerobic benzoate catabolism transcriptional regulator. (187 aa)    
Predicted Functional Partners:
dhaT
1%2C3-propanediol dehydrogenase.
 
  
 0.674
CUO30179.1
HipA-like C-terminal domain.
  
 
 0.618
pheA
P-protein.
  
  
 0.571
yvoA
HTH-type transcriptional repressor yvoA.
  
  
 0.564
yidP
Uncharacterized HTH-type transcriptional regulator yidP.
  
  
 0.564
guaA
GMP synthase [glutamine-hydrolyzing].
     
 0.556
argD_2
Acetylornithine aminotransferase.
 
     0.548
lutR
L-lactate utilization operon repressor.
 
  
 0.524
CUO38330.1
NADH oxidase.
  
  
 0.514
porA
Pyruvate synthase subunit porA.
  
 
 0.482
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.