STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN89658.1Stage III sporulation protein SpoAB. (172 aa)    
Predicted Functional Partners:
CUN89613.1
Uncharacterized protein conserved in bacteria.
 
  
 0.997
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.979
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.972
CUN89744.1
Stage III sporulation protein AD.
 
  
 0.969
CUN89874.1
Stage III sporulation protein AG.
 
  
 0.964
CUN89834.1
Stage III sporulation protein AF.
  
  
 0.876
CUN89913.1
SpoIIIAH-like protein.
  
  
 0.843
CUN34310.1
sigma-E processing peptidase SpoIIGA.
  
  
 0.791
spoIIE
Stage II sporulation protein E.
  
     0.717
spoIVB
SpoIVB peptidase precursor.
  
     0.709
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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