STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvyIPutative mannose-6-phosphate isomerase yvyI. (311 aa)    
Predicted Functional Partners:
glcK_1
Glucokinase.
 
  
 0.903
ptsG_2
EIICBA-Glc.
     
 0.842
CUO08938.1
Uncharacterized protein conserved in bacteria.
 
     0.825
bglC
Aryl-phospho-beta-D-glucosidase BglC; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.823
fruA_3
EIIABC-Fru.
  
  
 0.808
manX_6
EIIAB-Man.
 
   
 0.704
glcK_2
Glucokinase.
 
  
 0.652
treB
EIIBC-Tre.
  
  
 0.569
bglF_1
EIIBCA-Bgl.
  
  
 0.569
sacX
PTS system sac EIIBC component.
  
  
 0.569
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.