Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO18554.1 | CUO18592.1 | ERS852387_01706 | ERS852387_01707 | Predicted AAA-ATPase. | Putative PTS system fructose-like transporter subunit EIIB. | 0.470 |
CUO18554.1 | malL | ERS852387_01706 | ERS852387_01705 | Predicted AAA-ATPase. | Oligo-1%2C6-glucosidase. | 0.752 |
CUO18592.1 | CUO18554.1 | ERS852387_01707 | ERS852387_01706 | Putative PTS system fructose-like transporter subunit EIIB. | Predicted AAA-ATPase. | 0.470 |
CUO18592.1 | licR_6 | ERS852387_01707 | ERS852387_01708 | Putative PTS system fructose-like transporter subunit EIIB. | Probable licABCH operon regulator. | 0.542 |
CUO18592.1 | malL | ERS852387_01707 | ERS852387_01705 | Putative PTS system fructose-like transporter subunit EIIB. | Oligo-1%2C6-glucosidase. | 0.459 |
CUO18592.1 | manP_3 | ERS852387_01707 | ERS852387_01709 | Putative PTS system fructose-like transporter subunit EIIB. | EIIBCA-Man. | 0.542 |
licR_6 | CUO18592.1 | ERS852387_01708 | ERS852387_01707 | Probable licABCH operon regulator. | Putative PTS system fructose-like transporter subunit EIIB. | 0.542 |
licR_6 | manP_3 | ERS852387_01708 | ERS852387_01709 | Probable licABCH operon regulator. | EIIBCA-Man. | 0.817 |
malL | CUO18554.1 | ERS852387_01705 | ERS852387_01706 | Oligo-1%2C6-glucosidase. | Predicted AAA-ATPase. | 0.752 |
malL | CUO18592.1 | ERS852387_01705 | ERS852387_01707 | Oligo-1%2C6-glucosidase. | Putative PTS system fructose-like transporter subunit EIIB. | 0.459 |
manP_3 | CUO18592.1 | ERS852387_01709 | ERS852387_01707 | EIIBCA-Man. | Putative PTS system fructose-like transporter subunit EIIB. | 0.542 |
manP_3 | licR_6 | ERS852387_01709 | ERS852387_01708 | EIIBCA-Man. | Probable licABCH operon regulator. | 0.817 |