STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB33580.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00. (446 aa)    
Predicted Functional Partners:
CytR_1
KEGG: efa:EF1922 0.00067 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.712
EFB33588.1
Alpha amylase, catalytic domain protein; KEGG: pha:PSHAa1354 1.3e-120 alpha-amylase K01234; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.682
EFB33577.1
SusD family protein.
 
    0.551
EFB33586.1
Hypothetical protein; KEGG: xcv:XCV2800 8.1e-130 putative alpha-glucosidase K01187.
 
     0.480
EFB33578.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: shn:Shewana3_3063 0.0062 phosphatidylglycerophosphatase K01094.
 
     0.470
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.