STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB33001.1KEGG: bfr:BF0710 3.8e-61 CDP-diacylglycerol-serine O-phosphatidyltransferase K00998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (236 aa)    
Predicted Functional Partners:
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 0.997
cdsA
KEGG: bfs:BF0701 2.5e-80 putative phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.930
serB
KEGG: bth:BT0832 1.6e-156 putative phosphoserine phosphatase K01079:K07166; Psort location: Cytoplasmic, score: 8.96.
    
  0.905
ilvA
KEGG: tma:TM0356 1.5e-103 threonine dehydratase catabolic K01754; Psort location: Cytoplasmic, score: 8.96.
    
  0.901
TrpB
Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
  0.900
TdcG
KEGG: bth:BT4678 4.8e-164 L-serine dehydratase K01752; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
  0.900
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
  0.900
CysE
Putative serine O-acetyltransferase; KEGG: bth:BT3256 1.0e-106 serine acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
    
  0.801
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
     
  0.800
EFB33002.1
Hypothetical protein.
       0.742
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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