STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB32968.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
EFB32967.1
Hypothetical protein.
       0.785
EFB31583.1
Hypothetical protein.
  
   0.650
typA
GTP-binding protein TypA; KEGG: bur:Bcep18194_A4648 2.5e-158 typA; GTP-binding protein TypA K06207; Psort location: Cytoplasmic, score: 9.97.
       0.649
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
   0.583
EFB32969.1
Hypothetical protein.
       0.578
CoaW
Putative pantothenate kinase; Similar to putative CG5725-PE protein; KEGG: saa:SAUSA300_2084 4.7e-15 coaA; pantothenate kinase K00867.
  
     0.518
OmpA
OmpA family protein; KEGG: bxe:Bxe_A4171 0.0068 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92.
  
 
 0.507
EFB30477.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
  
 
 
 0.486
EFB30627.1
Peptidase M15; Psort location: Cytoplasmic, score: 8.96.
  
     0.468
EFB32394.1
Tetratricopeptide repeat protein.
  
    0.466
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.