Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EFB32486.1Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (224 aa)    
Predicted Functional Partners:
EFB32487.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.839
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
    0.772
YfiH
Conserved hypothetical protein, YfiH family; Psort location: Cytoplasmic, score: 8.96; Belongs to the multicopper oxidase YfiH/RL5 family.
 
  
 0.688
AspC
Aminotransferase, class I/II; KEGG: bth:BT1476 4.8e-187 aspartate aminotransferase K00812.
     
 0.682
LolE_2
Efflux ABC transporter, permease protein; KEGG: rru:Rru_A3236 3.9e-06 hypothetical protein K06020; Psort location: CytoplasmicMembrane, score: 10.00.
       0.673
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.666
PdxK
KEGG: cac:CAC1622 6.3e-43 pyridoxal kinase related protein K00868.
  
  
 0.563
rpmC
Ribosomal protein L29; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uL29 family.
   
    0.512
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
    0.497
rlmN
23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
 
     0.477
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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