Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFB32025.1Hypothetical protein. (395 aa)    
Predicted Functional Partners:
EFB32024.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 10.00.
 
    0.921
EFB33633.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.92.
 
    0.791
BtuB_4
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.92.
 
    0.790
EFB31140.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 10.00.
 
    0.758
EFB32023.1
Hypothetical protein.
       0.694
EFB31198.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 4.7e-07 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567.
 
     0.680
EFB33103.1
KEGG: bur:Bcep18194_C7173 3.6e-09 two component transcriptional regulator, AraC family.
 
     0.642
EFB33115.1
Hypothetical protein.
  
     0.613
EFB32530.1
Hypothetical protein.
 
     0.608
EFB31194.1
Hypothetical protein.
  
     0.542
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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