Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GarD | Por | HMPREF0971_00191 | HMPREF0971_02245 | SAF domain protein; KEGG: bth:BT0486 2.2e-182 altronate hydrolase K01685; Psort location: Cytoplasmic, score: 8.96. | KEGG: mta:Moth_0429 4.8e-148 mannitol dehydrogenase K00040. | 0.633 |
GarD | uxaC | HMPREF0971_00191 | HMPREF0971_01337 | SAF domain protein; KEGG: bth:BT0486 2.2e-182 altronate hydrolase K01685; Psort location: Cytoplasmic, score: 8.96. | Glucuronate isomerase; KEGG: bth:BT0823 2.3e-196 uronate isomerase K01812. | 0.583 |
GarD | uxuA | HMPREF0971_00191 | HMPREF0971_02246 | SAF domain protein; KEGG: bth:BT0486 2.2e-182 altronate hydrolase K01685; Psort location: Cytoplasmic, score: 8.96. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.949 |
Por | GarD | HMPREF0971_02245 | HMPREF0971_00191 | KEGG: mta:Moth_0429 4.8e-148 mannitol dehydrogenase K00040. | SAF domain protein; KEGG: bth:BT0486 2.2e-182 altronate hydrolase K01685; Psort location: Cytoplasmic, score: 8.96. | 0.633 |
Por | uxaC | HMPREF0971_02245 | HMPREF0971_01337 | KEGG: mta:Moth_0429 4.8e-148 mannitol dehydrogenase K00040. | Glucuronate isomerase; KEGG: bth:BT0823 2.3e-196 uronate isomerase K01812. | 0.981 |
Por | uxuA | HMPREF0971_02245 | HMPREF0971_02246 | KEGG: mta:Moth_0429 4.8e-148 mannitol dehydrogenase K00040. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.995 |
uxaC | GarD | HMPREF0971_01337 | HMPREF0971_00191 | Glucuronate isomerase; KEGG: bth:BT0823 2.3e-196 uronate isomerase K01812. | SAF domain protein; KEGG: bth:BT0486 2.2e-182 altronate hydrolase K01685; Psort location: Cytoplasmic, score: 8.96. | 0.583 |
uxaC | Por | HMPREF0971_01337 | HMPREF0971_02245 | Glucuronate isomerase; KEGG: bth:BT0823 2.3e-196 uronate isomerase K01812. | KEGG: mta:Moth_0429 4.8e-148 mannitol dehydrogenase K00040. | 0.981 |
uxaC | uxuA | HMPREF0971_01337 | HMPREF0971_02246 | Glucuronate isomerase; KEGG: bth:BT0823 2.3e-196 uronate isomerase K01812. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.953 |
uxuA | GarD | HMPREF0971_02246 | HMPREF0971_00191 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | SAF domain protein; KEGG: bth:BT0486 2.2e-182 altronate hydrolase K01685; Psort location: Cytoplasmic, score: 8.96. | 0.949 |
uxuA | Por | HMPREF0971_02246 | HMPREF0971_02245 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | KEGG: mta:Moth_0429 4.8e-148 mannitol dehydrogenase K00040. | 0.995 |
uxuA | uxaC | HMPREF0971_02246 | HMPREF0971_01337 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | Glucuronate isomerase; KEGG: bth:BT0823 2.3e-196 uronate isomerase K01812. | 0.953 |