STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaXDNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (599 aa)    
Predicted Functional Partners:
holA
KEGG: bfr:BF2396 1.4e-93 DNA polymerase III delta subunit K02340.
 
 
 0.983
DnaE
KEGG: bth:BT2230 0. DNA polymerase III alpha subunit K02337; Psort location: Cytoplasmic, score: 9.97.
 
 0.982
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.978
PolC
Exonuclease; KEGG: bfr:BF2980 3.1e-73 DNA polymerase III epsilon chain K02342; Psort location: Cytoplasmic, score: 8.96.
   
 0.945
DinG
Exonuclease; KEGG: pgi:PG0223 1.1e-56 exonuclease K02342; Psort location: Cytoplasmic, score: 8.96.
   
 0.945
EFB33257.1
Hypothetical protein; KEGG: bth:BT3820 5.9e-95 putative DNA polymerase III, delta subunit K02341.
  
  
 
0.910
Ssb
KEGG: shn:Shewana3_3590 1.2e-18 single-strand binding protein K00655.
   
 
 0.791
EFB31447.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.96.
  
    0.714
EFB31446.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.707
EFB31445.1
Hypothetical protein.
   
   0.620
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.