STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB30640.1DNA binding domain, excisionase family. (127 aa)    
Predicted Functional Partners:
EFB30641.1
Hypothetical protein.
 
     0.938
EFB30639.1
Hypothetical protein.
       0.780
XerD_2
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.758
XerC_1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.720
EFB30642.1
Hypothetical protein.
       0.705
XerC_3
Site-specific recombinase, phage integrase family.
 
     0.684
EFB30643.1
Hypothetical protein; KEGG: bsu:BG10313 2.2e-05 dnaG, dnaE; DNA primase K02316.
 
     0.629
EFB32187.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
     0.565
EFB30387.1
Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.540
traK-3
Conjugative transposon TraK protein.
 
     0.539
Your Current Organism:
Prevotella oris
NCBI taxonomy Id: 649760
Other names: P. oris F0302, Prevotella oris F0302, Prevotella oris str. F0302, Prevotella oris strain F0302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.