STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX19239.1HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. (315 aa)    
Predicted Functional Partners:
EEX19240.1
HipA domain protein; Overlaps another CDS with the same product name.
 
     0.960
EEX19241.1
Transcriptional regulator, y4mF family.
 
     0.952
EEX19612.1
DNA-binding helix-turn-helix protein.
  
   0.606
EEX19266.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
   0.606
EEX19127.1
DNA-binding helix-turn-helix protein.
  
   0.606
EEX18851.1
Hypothetical protein.
  
   0.606
EEX18906.1
Hypothetical protein.
  
   0.606
EEX17790.1
DNA-binding helix-turn-helix protein.
  
   0.606
EEX17739.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
   0.606
EEX17743.1
DNA-binding helix-turn-helix protein.
  
   0.606
Your Current Organism:
Prevotella veroralis
NCBI taxonomy Id: 649761
Other names: P. veroralis F0319, Prevotella veroralis F0319, Prevotella veroralis str. F0319, Prevotella veroralis strain F0319
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