Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX17739.1 | EEX19239.1 | HMPREF0973_02383 | HMPREF0973_00860 | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96. | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | 0.606 |
EEX17739.1 | EEX19240.1 | HMPREF0973_02383 | HMPREF0973_00861 | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96. | HipA domain protein; Overlaps another CDS with the same product name. | 0.606 |
EEX17743.1 | EEX17790.1 | HMPREF0973_02387 | HMPREF0973_02345 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.773 |
EEX17743.1 | EEX19239.1 | HMPREF0973_02387 | HMPREF0973_00860 | DNA-binding helix-turn-helix protein. | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | 0.606 |
EEX17743.1 | EEX19240.1 | HMPREF0973_02387 | HMPREF0973_00861 | DNA-binding helix-turn-helix protein. | HipA domain protein; Overlaps another CDS with the same product name. | 0.606 |
EEX17743.1 | EEX19612.1 | HMPREF0973_02387 | HMPREF0973_00554 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.548 |
EEX17790.1 | EEX17743.1 | HMPREF0973_02345 | HMPREF0973_02387 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.773 |
EEX17790.1 | EEX19239.1 | HMPREF0973_02345 | HMPREF0973_00860 | DNA-binding helix-turn-helix protein. | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | 0.606 |
EEX17790.1 | EEX19240.1 | HMPREF0973_02345 | HMPREF0973_00861 | DNA-binding helix-turn-helix protein. | HipA domain protein; Overlaps another CDS with the same product name. | 0.606 |
EEX18851.1 | EEX19239.1 | HMPREF0973_01386 | HMPREF0973_00860 | Hypothetical protein. | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | 0.606 |
EEX18851.1 | EEX19240.1 | HMPREF0973_01386 | HMPREF0973_00861 | Hypothetical protein. | HipA domain protein; Overlaps another CDS with the same product name. | 0.606 |
EEX18906.1 | EEX19239.1 | HMPREF0973_01441 | HMPREF0973_00860 | Hypothetical protein. | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | 0.606 |
EEX18906.1 | EEX19240.1 | HMPREF0973_01441 | HMPREF0973_00861 | Hypothetical protein. | HipA domain protein; Overlaps another CDS with the same product name. | 0.606 |
EEX19127.1 | EEX19239.1 | HMPREF0973_00911 | HMPREF0973_00860 | DNA-binding helix-turn-helix protein. | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | 0.606 |
EEX19127.1 | EEX19240.1 | HMPREF0973_00911 | HMPREF0973_00861 | DNA-binding helix-turn-helix protein. | HipA domain protein; Overlaps another CDS with the same product name. | 0.606 |
EEX19239.1 | EEX17739.1 | HMPREF0973_00860 | HMPREF0973_02383 | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96. | 0.606 |
EEX19239.1 | EEX17743.1 | HMPREF0973_00860 | HMPREF0973_02387 | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | DNA-binding helix-turn-helix protein. | 0.606 |
EEX19239.1 | EEX17790.1 | HMPREF0973_00860 | HMPREF0973_02345 | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | DNA-binding helix-turn-helix protein. | 0.606 |
EEX19239.1 | EEX18851.1 | HMPREF0973_00860 | HMPREF0973_01386 | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | Hypothetical protein. | 0.606 |
EEX19239.1 | EEX18906.1 | HMPREF0973_00860 | HMPREF0973_01441 | HipA-like C-terminal domain protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. | Hypothetical protein. | 0.606 |
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