STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX18905.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (83 aa)    
Predicted Functional Partners:
EEX18906.1
Hypothetical protein.
 
     0.927
EEX18907.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1482 5.7e-97 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.752
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.551
Your Current Organism:
Prevotella veroralis
NCBI taxonomy Id: 649761
Other names: P. veroralis F0319, Prevotella veroralis F0319, Prevotella veroralis str. F0319, Prevotella veroralis strain F0319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.