STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX18542.1RND transporter, HAE1 family; KEGG: eci:UTI89_C2351 9.6e-111 yegO; hypothetical protein YegO K07789; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1062 aa)    
Predicted Functional Partners:
EEX18541.1
Efflux transporter, RND family, MFP subunit; KEGG: gka:GK1024 0.0067 dihydrolipoamide acetyltransferase K00658; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.993
EEX18543.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Psort location: OuterMembrane, score: 10.00.
 0.993
EEX18069.1
Efflux transporter, RND family, MFP subunit; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.967
EEX18071.1
Efflux transporter, outer membrane factor lipoprotein, NodT family.
 0.967
EEX19657.1
Psort location: OuterMembrane, score: 9.92.
 
 0.857
EEX18544.1
Hypothetical protein.
       0.773
EEX19121.1
Hypothetical protein.
  
 0.765
EEX19137.1
Hypothetical protein; KEGG: gga:416985 0.0090 LOC416985; similar to citron; rho-interacting, serine/threonine kinase 21 K08282.
  
 0.765
yajC
Preprotein translocase, YajC subunit.
    
 
 0.742
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.594
Your Current Organism:
Prevotella veroralis
NCBI taxonomy Id: 649761
Other names: P. veroralis F0319, Prevotella veroralis F0319, Prevotella veroralis str. F0319, Prevotella veroralis strain F0319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.