STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmAKEGG: bfr:BF1624 6.5e-57 ribosomal protein L11 methyltransferase K02687; Psort location: Cytoplasmic, score: 8.96. (288 aa)    
Predicted Functional Partners:
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
 
 
 0.869
EEX18165.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.671
EEX19538.1
NOL1/NOP2/sun family protein; KEGG: lsl:LSL_0999 1.1e-45 putative 23S rRNA m(5)C methyltransferase K00599.
 
  
 0.642
EEX18166.1
KEGG: ddi:DDB0190674 0.0011 hypothetical protein K01146; Psort location: OuterMembrane, score: 9.49.
       0.631
EEX19465.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
  
 0.557
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.519
EEX19124.1
DnaJ domain protein.
  
  
 0.483
EEX19515.1
DnaJ domain protein; KEGG: cme:CMJ043C 5.0e-07 phycocyanobilin lyase alpha subunit K02288; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.469
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
  
 0.469
pheT
phenylalanine--tRNA ligase, beta subunit; KEGG: bfr:BF2565 1.1e-283 phenylalanyl-tRNA synthetase beta chain K01890; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.454
Your Current Organism:
Prevotella veroralis
NCBI taxonomy Id: 649761
Other names: P. veroralis F0319, Prevotella veroralis F0319, Prevotella veroralis str. F0319, Prevotella veroralis strain F0319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.