STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCRod shape-determining protein MreC. (293 aa)    
Predicted Functional Partners:
EEX18004.1
Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 6.2e-68 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.991
EEX18007.1
Putative penicillin-binding protein 2; KEGG: ppd:Ppro_2545 6.1e-77 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 8.02.
 
 
 0.954
EEX18640.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: bfr:BF0311 4.6e-182 penicillin-binding protein K03587; Psort location: CytoplasmicMembrane, score: 8.02.
 
 
 0.843
EEX19495.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: plt:Plut_0571 1.3e-42 peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 8.02.
 
 
 0.838
EEX18008.1
Cell cycle protein, FtsW/RodA/SpoVE family; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
  
 0.822
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.692
mreD
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 9.46.
  
    0.678
EEX18003.1
MGS-like domain protein; KEGG: bth:BT3812 2.1e-67 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase.
       0.672
EEX18550.1
Transglycosylase; KEGG: chu:CHU_3131 7.9e-171 ponA; bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family 51 protein.
  
 
 0.578
EEX18009.1
Hypothetical protein.
       0.532
Your Current Organism:
Prevotella veroralis
NCBI taxonomy Id: 649761
Other names: P. veroralis F0319, Prevotella veroralis F0319, Prevotella veroralis str. F0319, Prevotella veroralis strain F0319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.