STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61940.1ErfK/YbiS/YcfS/YnhG. (508 aa)    
Predicted Functional Partners:
EEZ61941.1
KEGG: ret:RHE_PB00012 1.3e-115 probable ABC transporter, ATP-binding protein K06022; Psort location: CytoplasmicMembrane, score: 9.49.
       0.773
EEZ61939.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.532
EEZ61943.1
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.531
EEZ61942.1
Peptidase, M50 family; KEGG: reh:H16_A1202 6.2e-29 Zn-dependent membrane-bound protease, M50 family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.499
EEZ61182.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tfu:Tfu_3064 4.1e-71 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
  
   
 0.494
EEZ61945.1
Pseudouridylate synthase; KEGG: gsu:GSU1403 2.8e-56 rluB; ribosomal large subunit pseudouridine synthase B K06178; Psort location: Cytoplasmic, score: 8.87; Belongs to the pseudouridine synthase RsuA family.
       0.493
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.490
EEZ60426.1
Tat pathway signal sequence domain protein; KEGG: cal:orf19.2859 5.4e-11 SRP40; nonribosomal protein of the nucleolus and coiled bodies K01186; Psort location: Extracellular, score: 9.55.
 
   
 0.485
rimI
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.417
EEZ61997.1
HDIG domain protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.416
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.