STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61953.1Hypothetical protein; KEGG: pen:PSEEN0261 2.5e-25 aguA; agmatine deiminase; Psort location: Cytoplasmic, score: 8.87. (417 aa)    
Predicted Functional Partners:
EEZ61952.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.701
EEZ61954.1
KEGG: pmu:PM0808 7.1e-51 arg; ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.98.
     
 0.668
EEZ61617.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.618
EEZ61955.1
Transporter, major facilitator family protein; KEGG: dre:30298 9.6e-05 jak2b; Janus kinase 2b K04447; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.586
EEZ61950.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.580
EEZ60321.1
Hypothetical protein; KEGG: cpe:CPE1043 0.00058 probable iron(III) dicitrate transport system K02013; Psort location: Cytoplasmic, score: 8.87.
  
     0.569
EEZ60528.1
KEGG: ava:Ava_B0209 0.00085 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.493
EEZ60830.1
LPXTG-motif cell wall anchor domain protein; KEGG: nfa:nfa2840 1.2e-05 putative DNA polymerase III gamma subunit K02343; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.449
EEZ61951.1
KEGG: ava:Ava_B0209 0.00024 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
       0.440
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.437
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.