STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61964.1KEGG: aha:AHA_2937 3.9e-27 taurine ABC transporter, ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49. (213 aa)    
Predicted Functional Partners:
EEZ61963.1
KEGG: rha:RHA1_ro08170 5.0e-06 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 9.97.
 
 0.998
EEZ61962.1
Tat pathway signal sequence domain protein.
 
 
 0.971
EEZ61595.1
KEGG: rha:RHA1_ro08170 1.7e-19 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.826
EEZ61328.1
NLPA lipoprotein.
  
 
 0.811
EEZ61965.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.87.
     
 0.774
EEZ61961.1
Hypothetical protein; KEGG: fal:FRAAL1923 3.2e-05 ribonuclease E homolog; Psort location: CytoplasmicMembrane, score: 9.26.
       0.773
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.538
modB-2
Molybdate ABC transporter, permease protein; KEGG: pac:PPA0505 3.9e-27 ABC transporter, putative molybdenum transport system K02017:K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.529
EEZ61966.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.528
EEZ60832.1
KEGG: sth:STH653 8.4e-25 iron ABC transporter ATP-binding protein K02013; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.522
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.